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Table 3 List of differentially regulated phosphoproteins with significant characteristics during plant regeneration initiation

From: Global landscape of protein phosphorylation during plant regeneration initiation in cotton (Gossypium hirsutum L.)

Protein accession

Protein description

Gene name

Modified sequence

PEC/NEC Ratio

GE/PEC Ratio

HCA-

cluster

A0A1U8IET8

Cold shock domain-containing protein 3-like

LOC107895883

DCSNNVNDDYNH(S)PR

5.73

0.45

Cluster5

A0A1U8J8Q5

65-kDa microtubule-associated protein 1-like

LOC107903477

DDAASHV(S)R

2.067

0.436

Cluster5

A0A1U8JHR4

Phosphoprotein ECPP44-like

LOC107905666

(S)DEEKEK

2.152

0.257

Cluster5

AEEAS(S)PAPAPAAEPHHEGESK

3.016

0.468

Cluster5

A0A1U8JSS9

Heterogeneous nuclear ribonucleoprotein 1-like

LOC107910091

AEGRF(S)PVTVGR

4.553

0.269

Cluster5

A0A1U8KP64

Ctenidin-3

LOC107919288

GGCGGSGGGSGNVGGGST(S)K

9.23

0.284

Cluster5

GAFESNPQGYFAGLHS(S)EK

3.373

0.452

Cluster5

A0A1U8LCC5

Uncharacterized protein

LOC107926000

G(S)PDQSEVR

2.07

0.358

Cluster5

A0A1U8LUA1

Uncharacterized protein

LOC107929806

YSS(S)PEATSMVLVGCPR

3.629

0.488

Cluster5

YS(S)SPEATSMVLVGCPR

3.629

0.488

Cluster5

A0A1U8M2Q7

KH domain-containing protein

LOC107933392

FEHD(S)PIR

2.268

0.359

Cluster5

A0A1U8M3Z7

65-kDa microtubule-associated protein 1-like

LOC107932768

EDAA(S)HVSR

2.032

0.455

Cluster5

A0A1U8MBQ0

Uncharacterized protein LOC107935001

LOC107935001

SQ(S)FSNDDLEELK

2.567

0.449

Cluster5

A0A1U8MG12

Syntaxin-132-like

LOC107936317

LID(T)GDSEQIFQK

3.638

0.397

Cluster5

A0A1U8MGI6

Phosphoprotein ECPP44-like

LOC107937569

(S)DEEKEK

2.556

0.203

Cluster5

CDEPVVQPE(T)PEKK

3.018

0.312

Cluster5

LPGYH(S)KSDEEK

2.701

0.213

Cluster5

A0A1U8MV80

MLO-like protein

LOC107941659

LTHET(S)FVK

2.062

0.456

Cluster5

A0A1U8N5A2

Heptahelical transmembrane protein 1-like

LOC107943738

VQ(S)PPSSPSYGLVTFK

5.921

0.241

Cluster5

A0A1U8PI09

ABC transporter G family member 15-like

LOC107959300

TLEHLDKRP(S)FR

3.292

0.483

Cluster5

KVP(S)LASSK

4.455

0.426

Cluster5

KVP(S)LASSK

4.71

0.391

Cluster5

G8AA64

Mitogen-activated protein kinase kinase 6

MKK6

ESRP(S)DAK

2.034

0.453

Cluster5

A0A1U8NJ46

AMP deaminase-like isoform X2

LOC107948947

LH(T)LPEAK

0.169

2.087

Cluster4

A0A1U8NLG6

Putative metallophosphoesterase At3g03305 isoform X3

LOC107949530

FLSV(S)GK

0.36

3.865

Cluster1

A0A1U8NQD2

Dentin sialophosphoprotein-like isoform X2

LOC107950755

ILASN(S)LK

0.376

2.249

Cluster4

A0A1U8NYX9

Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and protein-tyrosine-phosphatase PTEN2A-like

LOC107953381

FT(S)GFGLR

0.223

2.219

Cluster4

B6RF02

14–3-3-like protein A

LOC107953447

EA(S)KHESGEGQQ

0.401

2.918

Cluster1