Fig. 3

5hmC peaks associated with differential gene expression. A KEGG analysis of 5hmC marked genes that gain 5hmC in liver metastasis. B Volcano plot for gene expression changes after metastatic transition (data from [28]). Darker dots identify genes with at least one overlapping and significantly enriched 5hmC peak in hMeDIP-seq. C A core cadherin 2 (CDH2) and fibrinogen (FN1) network of associations for genes that have increased 5hmC and upregulated expression during metastasis