Table 7 R packages used to generate this manuscript. Please see the ManyEcoEvo: package for a full list of packages used in the analysis pipeline
Package | Version | Citation |
|---|---|---|
base | 4.4.0 | R Core Team (R Core Team [87] |
betapart | 1.6 | Baselga et al. (2023) |
broom.mixed | 0.2.9.5 | Bolker et al. [13] |
colorspace | 2.1.0 | Zeileis et al. [122] |
cowplot | 1.1.3 | Wilke [118] |
devtools | 2.4.5 | Wickham et al. (Wickham et al. [116]) |
EnvStats | 2.8.1 | Millard (Millard [68]) |
GGally | 2.2.1 | Schloerke et al. (Schloerke et al. [91]) |
ggforestplot | 0.1.0 | Scheinin et al. (Scheinin et al. [90]) |
ggh4x | 0.2.8 | van den Brand [109] |
ggpubr | 0.6.0 | Kassambara (Kassambara [47]) |
ggrepel | 0.9.5 | Slowikowski (Slowikowski [102]) |
ggthemes | 5.1.0 | Arnold [6] |
glmmTMB | 1.1.8 | Brooks et al. ([18]) |
gt | 0.10.1 | Iannone et al. (Iannone et al. [45]) |
gtsummary | 1.7.2 | Sjoberg et al. [101] |
here | 1.0.1 | Müller Müller [71] |
Hmisc | 5.1.2 | Harrell Jr [41] |
irr | 0.84.1 | Gamer, Lemon, and Singh ([35]) |
janitor | 2.2.0 | Firke (Firke [32]) |
knitr | 1.46 | Xie (Xie [119]) |
latex2exp | 0.9.6 | Meschiari (Meschiari [66]) |
lme4 | 1.1.35.3 | Bates et al. [11] |
ManyEcoEvo | 2.7.6 | Gould et al. [38] |
metafor | 4.6.0 | Viechtbauer [114] |
modelbased | 0.8.7 | Makowski et al. (Makowski et al. [64]) |
multilevelmod | 1.0.0 | Kuhn and Frick (Kuhn and Frick [54]) |
MuMIn | 1.47.5 | Bartoń [9] |
naniar | 1.1.0 | Tierney and Cook [106] |
NatParksPalettes | 0.2.0 | Blake (Blake [12]) |
orchaRd | 2 | Nakagawa, Lagisz, et al. (2023) |
parameters | 0.21.7 | Lüdecke et al. [60] |
patchwork | 1.2.0 | Pedersen [84] |
performance | 0.11.0 | Lüdecke, Ben-Shachar, et al. [61] |
renv | 1.0.2 | Ushey and Wickham (Ushey and Wickham [108]) |
rmarkdown | 2.27 | Allaire et al. [3] |
sae | 1.3 | Molina and Marhuenda (Molina and Marhuenda [69]) |
scales | 1.3.0 | Wickham, Pedersen, and Seidel [117] |
see | 0.8.4 | Lüdecke, Patil, et al. [62] |
showtext | 0.9.7 | Qiu Qiu [86] |
specr | 1.0.0 | Masur and Scharkow (Masur and Scharkow [65]) |
targets | 1.7.0 | Landau [57] |
tidymodels | 1.1.1 | Kuhn and Wickham [55] |
tidytext | 0.4.2 | Silge and Robinson [97] |
tidyverse | 2.0.0 | Wickham et al. [115] |
withr | 3.0.0 | Hester et al. (Hester et al. [42]) |
xfun | 0.44 | Xie (Xie [120]) |