Table 1 Summary of Scylla paramamosain genome assembly
Stat type | Contig length (bp) | Contig number | Scaffold length (bp) | Scaffold number | Gap length (bp) | Gap number |
|---|---|---|---|---|---|---|
N50 | 11,448,802 | 37 | 23,607,973 | 20 | 100 | 113 |
N60 | 9,208,292 | 49 | 21,816,234 | 25 | 100 | 135 |
N70 | 6,865,899 | 64 | 19,336,055 | 31 | 100 | 158 |
N80 | 3,900,000 | 87 | 15,570,585 | 38 | 100 | 180 |
N90 | 1,000,000 | 151 | 9,316,856 | 47 | 100 | 203 |
Longest | 30,957,417 | 1 | 42,181,690 | 1 | 100 | 225 |
Total | 1,210,737,920 | 458 | 1,210,760,420 | 233 | 22,500 | 225 |
Length ≥ 1 kb | 1,210,737,920 | 458 | 1,210,760,420 | 233 | 0 | 0 |
Length ≥ 2 kb | 1,210,737,920 | 458 | 1,210,760,420 | 233 | 0 | 0 |
Length ≥ 5 kb | 1,210,737,920 | 458 | 1,210,760,420 | 233 | 0 | 0 |