Fig. 4

Identification of direct transcriptional targets of CgCrzA under CFW conditions through Genome-wide ChIP-seq analysis. A Genome-scale view of ChIP-seq data represented as log₂ (IP_RPKM/Input_RPKM) signals calculated for each 50 bp. Enriched ChIP signals above the horizontal blue line (log₂IP_RPKM/Input_RPKM = 0) indicate significant binding compared to the input control. B Snapshot ChIP of signals for genes identified in (A). C Most likely DNA motif bound by CgCrzA, identified using MEME tools. D Distribution of peaks among different gene features in C. gloeosporioides. E Genome-wide distribution of putative CgCrzA target genes. F Gene Ontology categorization of the putative CgCrzA target genes