Fig. 4
Association between genetic and methylation differentiation. A Correlation between F ST and M diff. B Gene profile for M diff. Gene profile for non-CpG (C) and CpG F ST (D). Different lines in (A and D) are different tissues. Different line types represent the average for different promoter types. See Additional file 2: Fig. S3 for (A and D) colored by tissue. Lines in plots represent loess curves with shaded region representing the 95% confidence interval of the local regression. The legend for “Annotation” refers to panels (A–C), while F ST refers to panel (D), and “Promoter type” refers to all panels. For M diff: n = 6 COL and n = 5 PIE samples were used per tissue (generated within this study). For F ST: n = 19 COL and n = 19 PIE individuals were used [65]. M diff and F ST were averaged in bins for n = 8563 genes